Changelog¶
0.0.21 (2019-07-08)¶
Bug Fixes¶
- add debug log message in ssclash (8e50b10)
- add debug log message in ssclash (beb4935)
- avoid key errors if all parameters don’t exist with pdbqual command (ea0e556)
- change api key for semantic delivery (8eba464)
- change dependencies in setup.py (eb5c0be)
- change depreacted CI var in gitlab ci conf file (74463c0)
- change depreacted CI var in gitlab ci conf file (4464019)
- escape percent character within csh script for format function (a785ce9)
- force python 2.7 dependency (99041c7)
- force python 2.7 dependency (5f3380d)
- future dependency in dockerfile (0d1d39e)
- implement setting.get method used within pdbqual tool (a8d66dc)
- implement setting.get method used within pdbqual tool (1832c26)
- remove logger during serialization for distance restraint class (0465e1b)
- remove sge_job_id var in csh script refine for sbatch options (a036e7f)
- removed unicode strings during convert part (39d1d47)
- revision of output slurm file for cns refine.csh (8d14ebd)
- solve conflict issue between pdbqual and setup config parameters (48a05e2)
- solve import issue with pdbqual command (737dd53)
- solve issue #24 (aeda4d1)
- solve issue with missing alignment for evcoupling contacts (c6f3afc)
- solve issue with warnings in the logger (990419e)
- solve numpy dependency issue with hdbscan (bf3c81c)
- solve several format issues in the new logging system (eff5776)
- sphinx crash with 1.8 due to python 3 dependencies (fd0efa1)
- syntax error for clashlist flag in aria project templates (9b270f0)
- Update ariabase.py getstate (6c209af)
- update doc confs with the new project tree (46dff44)
- update dockerfile (541d72c)
- update dockerfile (40b59e9)
- update dockerfile (00d6865)
- wget dependency in dockerfile (bdf572c)
- wrong installation order in dockerfile for husky npm module (934a449)
- wrong installation order in dockerfile for husky npm module (c83c314)
- aria.core.TypeChecking: overwrite previous python3 patch (dbca55a)
- aria.core.TypeChecking: solve byte string type checker issue when running the package with python3 (07fb1c6)
Features¶
- add options to activate or deactivate pdq quality tools (pdbqual command) (4a54d05)
- add structure_analysis_enabled option within conbox commands (e88a654)
- add v2.3.7 aria project template (1b9fa48)
- Automatic changelog (8fda476)
- Automatic changelog (23e095b)
- molecule settings hack in order to support multiple chains (164f187)
- new logging system for aria core (223c58d)
- new logging system for aria core (1fd579c)
- safe xml tag checker for python3 (d8b091e)
- semantic delivery gitlab (b11664f)